You’ll be fine, consider the fact that all new trolling motors come with a transducer literally mounted on the head of the trolling motor. The interference is caused by electrical pulses…for example by having your trolling motor on the same battery, you will see the draw of the trolling motor on your electronics. No different than when people hook their electronics to their boats terminal bus, your lights livewells etc will project interference.
although gypsy says he doesn’t see it, he may not even know what he’s looking for, or have electronics sensitive enough that it’s noticeable. I can assure you, there’s a very noted difference between high end electronics that are installed correctly vs not.
I’ll tell you right now, you won’t find a single guy that’s running $10,000+ worth of electronics on their boat with the electronics hooked to their trolling motor battery.